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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944176.1_cds_XP_016487111.1_77884
CDS Infomation

[gene=LOC107807272] [db_xref=GeneID:107807272] [protein=aquaporin NIP1-1-like isoform X2] [protein_id=XP_016487111.1] [location=complement(join(18880..19111,19677..19738,20120..20317,21098..21319,21591..21671))] [gbkey=CDS]
Sequence

ATGAACAGCAACAACAAGACTTCTGCACATGAAGATTCTTCATCAAGCTGTTGCTTTGTC
ACTGTTCCCTTCATCCAAAAGATAATAGCGGAGACATTAGGGACGTACTTCTTGATATTT
GCGGGGTGTGGTTCAGTGGCGGTGAATGCAGACAAAGGAATGGTTACTTTCCCTGGTATC
TCCATTGTCTGGGGGCTGGTGGTTATGGTCATGGTTTACTCTGTTGGCCACATTTCTGGT
GCTCATTTTAACCCTGCTGTTACCATTTCCTTTGCCACTTGCAAAAGGTTCCCATGGAAA
CAGGTACCAGCTTACGTGGCAGCTCAAGTGATTGGATCAACCCTAGCAAGCGGAACCCTA
CGACTAATATTCAATGGCAAACATGATCATTTTCTTGGAACTTCACCCTCTGGATCAGAT
ATCCAATCTCTTGTTCTGGAATTTATTATCACATTTTATCTTATGTTTGTCGTTTCTGGT
GTCGCAACTGATAATCGAGCGATAGGAGAACTTGCTGGTCTTGCTGTGGGGGCAACCGTG
TTGCTTAATGTGATGTTTGCCGGACCGATATCAGGAGCGTCGATGAACCCAGCAAGGAGT
TTGGGCCCAGCAATAGTATGGAGCCATTACAGAGGTATATGGGTTTACATGTTAGGCCCA
ACAGCTGGGGCCATATCAGGTGCTTGGGTCTATAACATCATCAGATTCACAGACAAGCCT
TTACGTGAGATTACCAAAAGTGGATCTTTCCTCAAGTCCATCAGATCAAGCAAGTCCCTC
AGATCTAGCACGTAA

Peptide Sequence

PEP ID

XP_016487111.1
PEP Infomation

PREDICTED: aquaporin NIP1-1-like isoform X2 [Nicotiana tabacum]
Sequence

MNSNNKTSAHEDSSSSCCFVTVPFIQKIIAETLGTYFLIFAGCGSVAVNADKGMVTFPGI
SIVWGLVVMVMVYSVGHISGAHFNPAVTISFATCKRFPWKQVPAYVAAQVIGSTLASGTL
RLIFNGKHDHFLGTSPSGSDIQSLVLEFIITFYLMFVVSGVATDNRAIGELAGLAVGATV
LLNVMFAGPISGASMNPARSLGPAIVWSHYRGIWVYMLGPTAGAISGAWVYNIIRFTDKP
LREITKSGSFLKSIRSSKSLRSST

Transcript Sequence

Gene sequence data has not been registered.